Preprocessing#

Classes for preprocessing molecules.


ConformerGenerator

Generate molecule conformer.

MolFromSmilesTransformer

Creates RDKit Mol objects from SMILES strings.

MolStandardizer

Performs common molecule standardization operations.

MolToSmilesTransformer

Creates SMILES strings from RDKit Mol objects.

Molecular filters:

BasicZINCFilter

Basic ZINC filter.

BMSFilter

BMS filter.

BrenkFilter

Brenk filter.

GlaxoFilter

Glaxo filter.

InpharmaticaFilter

Inpharmatica filter.

LINTFilter

LINT filter.

LipinskiFilter

Lipinski's Rule of 5 (RO5).

MLSMRFilter

MLSMR filter.

MolecularWeightFilter

Molecular weight filter.

NIHFilter

NIH filter.

PAINSFilter

Pan Assay Interference Compounds (PAINS) filter.

SureChEMBLFilter

SureChEMBL filter.